The average length (nt) was 939. For Mxa, there were 7,656 gene predictions, with an average length (nt) of 1075. These SRT1720 research buy data are consistent with the concept

that Sco has more and smaller genes, than Mxa. Transporters of experimentally verified function in Sco and Mxa We have screened the published literature for articles that provide experimental information about transporters in Sco and Mxa. A summary of the findings are presented in Table 11 which gives the protein designations, the Sco or Mxan genome numbers and the references in column 1, the UniProt accession numbers in column 2, the TC#s of the transport systems in column 3, and the probable functions plus additional information if available in column 4. Of these proteins, only one system (AreABCD) of Sco was not included in our initial G-blast screen. It was missed because these Crenigacestat sequences were too distant to anything then in TCDB to give a score better than our cutoff value of 0.001. The AreABCD export system has been assigned TC# 3.A.1.146.1 and represents a new family within the ABC superfamily. Table 11 Functionally characterized Sco and Mxa learn more proteins Protein designation; Sco# or Mxan#, and reference1 UniProt Acc# TC# Probable or established function S. coelicolor MscL; Sco3190 [102] Q9KYV5 1.A.22.1.10 MscL, osmotic adaptation

channel that influences sporulation and secondary metabolite production. GlcP1/2; Sco7153; Sco5578 [103] Q7BEC4 2.A.1.1.35 MFS major glucose uptake porters (two identical sequences at the AA level, and having a single substitution on the NT level). MdrA; Sco4007 [104] Q9ADP8

2.A.1.36.4 Putative MDR transporter; may export hydrophobic cationic compounds. PitH1 and 2; Sco4138 and Sco1845 [105] Q9KZW3, Q9RJ23 2.A.20.1.5 and 6 Two putative low-affinity inorganic phosphate (Pi) uptake porters. DasABC: Sco5232-4 (R, M, M). MsiK: Sco4240 (C) [106] Q9K489-91,Q9L0Q1 3.A.1.1.33 DasABC/MsiK; system for the uptake of chitin-degradation products. Agl3EFG porter (R, M, M; Sco7167-Sco7165 [107]; Agl3K (C; unknown) Q9FBS7-5 3.A.1.1.43 Sugar uptake porter; induced by trehalose and melibiose using a GntR transcription factor. May use the MsiK ATPase [106]. MalEFG; Sco2231-Sco2229 (R, M, M) [108]; MalK (C) unknown. Q7AKP1, Q9KZ07-8 3.A.1.1.44 Carnitine dehydrogenase Sugar uptake porter; involved in maltose and maltodextrin uptake. May use the MsiK ATPase [106]. XylFGH. O50503-5 3.A.1.2.24 Xylose uptake porter; transcriptionally regulated by a GntR-type protein, ROK7B7. XylF, Sco6009 (R; 1 N-terminal TMS); XylG, Sco6010 (C; ATP-binding, no TMSs); XylH, Sco6011 (M; 12 TMSs); [109] Probable ABC peptide uptake porter; Sco5476-80 (M, R, M, C, C) [110] O86571-5 3.A.1.5.34 Probably takes up a peptide involved in the regulation of sporulation and secondary metabolite production. Sco5117-Sco5121 (R, M, M, C, C) [111] Q9F353-49 3.A.1.5.35 Probable oligopeptide uptake porter.